MESSAGE
DATE | 2017-03-28 |
FROM | Ruben Safir
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SUBJECT | Subject: [Learn] computations
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From learn-bounces-at-nylxs.com Tue Mar 28 23:11:10 2017 Return-Path: X-Original-To: archive-at-mrbrklyn.com Delivered-To: archive-at-mrbrklyn.com Received: from www.mrbrklyn.com (www.mrbrklyn.com [96.57.23.82]) by mrbrklyn.com (Postfix) with ESMTP id 33726161312; Tue, 28 Mar 2017 23:11:10 -0400 (EDT) X-Original-To: learn-at-nylxs.com Delivered-To: learn-at-nylxs.com Received: from [10.0.0.62] (flatbush.mrbrklyn.com [10.0.0.62]) by mrbrklyn.com (Postfix) with ESMTP id BC913160E77; Tue, 28 Mar 2017 23:11:06 -0400 (EDT) To: "learn-at-nylxs.com" From: Ruben Safir Message-ID: <55eb9c49-09df-4cf7-441b-0b484e167fdc-at-mrbrklyn.com> Date: Tue, 28 Mar 2017 23:11:06 -0400 User-Agent: Mozilla/5.0 (X11; Linux x86_64; rv:45.0) Gecko/20100101 Thunderbird/45.8.0 MIME-Version: 1.0 Subject: [Learn] computations X-BeenThere: learn-at-nylxs.com X-Mailman-Version: 2.1.17 Precedence: list List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Content-Type: text/plain; charset="utf-8" Content-Transfer-Encoding: quoted-printable Errors-To: learn-bounces-at-nylxs.com Sender: "Learn"
http://www.transmittingscience.org/courses/phylogeny/quantitative-cladistic= s-use-tnt/
3rd Edition Quantitative Cladistics and Use of TNT
October 2nd-6th, 2017, Barcelona (Spain)
Quantitative Cladistics and Use of TNT
This course will cover the basics of parsimony analysis and character optimisation, tree-searches, diagnosing and summarising results efficiently, and measuring group supports.
This course will be informal, with extensive hands-on exercises which will help students get familiar with the main aspects of phylogenetic analysis using TNT. For each of the units in the course, there will be a lecture (one to two hours, depending on the topics), then switching to exercises illustrating the points just seen in the lecture. Switches between =E2=80=9Clecture=E2=80=9D and =E2=80=9Chands-on=E2=80=9D mode will = be dynamic, depending on how students progress with the exercises.
This course will make extensive use of TNT. There will also be a demonstration and some practice with GB->TNT, a program to create TNT matrices from GenBank data (in turn, GB->TNT requires installation of an alignment program, ideally Mafft or Muscle and possibly BioEdit to inspect alignments).
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